21.5 Limitations

The command line interface currently has the following limitations:

• Data must be exported from your current Geneious database to a file on your drive in order to be accessed by the CLI.
• The content of dialog windows that would normally show in Geneious may not be visible in the command line (this may include operations that return no result)
• The name of the file output from the CLI may not necessarily be the same as the name of the sequence document within the file that is displayed when imported into Geneious.

The command line interface is under active development. If you would like to see additional functionality or have any comments regarding it, please contact support.