Uses of Class
com.biomatters.geneious.publicapi.databaseservice.RetrieveCallback
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Packages that use RetrieveCallback Package Description com.biomatters.geneious.publicapi.databaseservice Provides the interface and associated classes for defining a database service which is a service that appears on the left-hand side of the main Geneious window and provides the user with access to a database, for example NCBI or the local database for storing the user's documents. -
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Uses of RetrieveCallback in com.biomatters.geneious.publicapi.databaseservice
Subclasses of RetrieveCallback in com.biomatters.geneious.publicapi.databaseservice Modifier and Type Class Description class
CompositeRetrieveCallback
ARetrieveCallback
that is suitable for a task that consists of several subtasks.Fields in com.biomatters.geneious.publicapi.databaseservice declared as RetrieveCallback Modifier and Type Field Description static RetrieveCallback
RetrieveCallback. EMPTY
Methods in com.biomatters.geneious.publicapi.databaseservice with parameters of type RetrieveCallback Modifier and Type Method Description protected abstract void
WritableDatabaseService. _retrieve(Query query, RetrieveCallback callback, URN[] urnsToNotRetrieve)
Implementation method forWritableDatabaseService.retrieve(com.biomatters.geneious.publicapi.databaseservice.Query, com.biomatters.geneious.publicapi.databaseservice.RetrieveCallback, com.biomatters.geneious.publicapi.documents.URN[])
that subclasses should implement.protected void
WritableDatabaseService. _retrieve(AnnotatedPluginDocument[] summaryDocuments, RetrieveCallback callback, URN[] urnsToNotRetrieve)
Implementation method forWritableDatabaseService.retrieve(com.biomatters.geneious.publicapi.documents.AnnotatedPluginDocument[], com.biomatters.geneious.publicapi.databaseservice.RetrieveCallback, com.biomatters.geneious.publicapi.documents.URN[])
that subclasses should implement.protected abstract void
WritableDatabaseService. _retrieve(URN[] urnsToRetrieve, RetrieveCallback callback)
Implementation method forWritableDatabaseService.retrieve(com.biomatters.geneious.publicapi.documents.URN[], com.biomatters.geneious.publicapi.databaseservice.RetrieveCallback)
that subclasses should implement.protected void
WritableDatabaseService.DummyService. _retrieve(Query query, RetrieveCallback callback, URN[] urnsToNotRetrieve)
protected void
WritableDatabaseService.DummyService. _retrieve(URN[] urnsToRetrieve, RetrieveCallback callback)
void
DatabaseService. batchSequenceSearch(java.util.List<AnnotatedPluginDocument> querySequences, java.lang.String program, Options options, RetrieveCallback callback)
If this is a Sequence Database (ie.void
DatabaseService. resumeSearch(java.lang.String uniqueIdentifier, RetrieveCallback callback)
Deprecated.Geneious no longer supports resuming searchesabstract void
DatabaseService. retrieve(Query query, RetrieveCallback callback, URN[] urnsToNotRetrieve)
Get documents by searching a database.void
DatabaseService. retrieve(AnnotatedPluginDocument[] summaryDocuments, RetrieveCallback callback, URN[] urnsToNotRetrieve)
Retrieves full documents corresponding to the given summary documents from the database.void
DatabaseService. retrieve(URN[] urnsToRetrieve, RetrieveCallback callback)
Retrieve documents with the specified URNs.void
WritableDatabaseService. retrieve(Query query, RetrieveCallback callback, URN[] urnsToNotRetrieve)
void
WritableDatabaseService. retrieve(AnnotatedPluginDocument[] documents, RetrieveCallback callback, URN[] urnsToNotRetrieve)
void
WritableDatabaseService. retrieve(URN[] urnsToRetrieve, RetrieveCallback callback)
void
DatabaseService. sequenceSearch(AnnotatedPluginDocument querySequence, java.lang.String program, Options options, RetrieveCallback callback)
If this is a Sequence Database (ie.Constructors in com.biomatters.geneious.publicapi.databaseservice with parameters of type RetrieveCallback Constructor Description CompositeRetrieveCallback(RetrieveCallback internalCallback, double... operationDuration)
construct a new composite RetrieveCallback.CompositeRetrieveCallback(RetrieveCallback internalCallback, int numberOfEvenlyWeightedSubTasks)
Construct a CompositeProgressListener with a number of evenly weighted subtasks.RetrieveCallback(RetrieveCallback internalCallback)
Creates a wrapper callback that delegates all non-overriden methods to an internal callback class.
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