Uses of Class
com.biomatters.geneious.publicapi.plugin.DocumentOperation
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Packages that use DocumentOperation Package Description com.biomatters.geneious.publicapi.plugin Provides theGeneiousPlugin
interface and plugin related interfaces. -
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Uses of DocumentOperation in com.biomatters.geneious.publicapi.plugin
Subclasses of DocumentOperation in com.biomatters.geneious.publicapi.plugin Modifier and Type Class Description static class
DocumentOperation.Wrapper
Provides a wrapper DocumentOperation that delegates all methods (exceptgetUniqueId()
) to the wrapped operation.class
GeneiousGridDocumentOperation
A grid-aware version ofDocumentOperation
, containing many convenience features to simplify the task of creating a grid-aware DocumentOperation.Methods in com.biomatters.geneious.publicapi.plugin that return DocumentOperation Modifier and Type Method Description static DocumentOperation
PluginUtilities. getAlignmentOperation(java.lang.String uniqueIdPrefix, SequenceDocument.Alphabet alphabet)
Get aDocumentOperation
representation of anAlignmentOperation
.static DocumentOperation
PluginUtilities. getCategoryOperation(GeneiousActionOptions.Category category)
Get the category operation that includes all other operations in this category.static DocumentOperation
PluginUtilities. getDocumentOperation(java.lang.String uniqueID)
get the DocumentOperation with the given unique ID.DocumentOperation[]
GeneiousPlugin. getDocumentOperations()
ADocumentOperation
takes one or more existing documents and uses them to create a set of new documents.Methods in com.biomatters.geneious.publicapi.plugin that return types with arguments of type DocumentOperation Modifier and Type Method Description static java.util.List<DocumentOperation>
PluginUtilities. getDocumentOperations()
Get a list of allDocumentOperation
s provided by all currently installed plugins.Methods in com.biomatters.geneious.publicapi.plugin with parameters of type DocumentOperation Modifier and Type Method Description static GeneiousPlugin
PluginUtilities. getPluginForDocumentOperation(DocumentOperation operation)
Get theGeneiousPlugin
that provides a givenDocumentOperation
viaGeneiousPlugin.getDocumentOperations()
Constructors in com.biomatters.geneious.publicapi.plugin with parameters of type DocumentOperation Constructor Description Wrapper(DocumentOperation wrappedOperation)
Constructs a new wrapper operation
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